tf.contrib.distributions.Autoregressive

View source on GitHub

Autoregressive distributions.

Inherits From: Distribution

tf.contrib.distributions.Autoregressive(
    distribution_fn, sample0=None, num_steps=None, validate_args=False,
    allow_nan_stats=True, name='Autoregressive'
)

The Autoregressive distribution enables learning (often) richer multivariate distributions by repeatedly applying a diffeomorphic transformation (such as implemented by Bijectors). Regarding terminology,

"Autoregressive models decompose the joint density as a product of conditionals, and model each conditional in turn. Normalizing flows transform a base density (e.g. a standard Gaussian) into the target density by an invertible transformation with tractable Jacobian." [(Papamakarios et al., 2016)][1]

In other words, the "autoregressive property" is equivalent to the decomposition, p(x) = prod{ p(x[i] | x[0:i]) : i=0, ..., d }. The provided shift_and_log_scale_fn, masked_autoregressive_default_template, achieves this property by zeroing out weights in its masked_dense layers.

Practically speaking the autoregressive property means that there exists a permutation of the event coordinates such that each coordinate is a diffeomorphic function of only preceding coordinates [(van den Oord et al., 2016)][2].

Mathematical Details

The probability function is

prob(x; fn, n) = fn(x).prob(x)

And a sample is generated by

x = fn(...fn(fn(x0).sample()).sample()).sample()

where the ellipses (...) represent n-2 composed calls to fn, fn constructs a tfp.distributions.Distribution-like instance, and x0 is a fixed initializing Tensor.

Examples

import tensorflow_probability as tfp
tfd = tfp.distributions

def normal_fn(self, event_size):
  n = event_size * (event_size + 1) / 2
  p = tf.Variable(tfd.Normal(loc=0., scale=1.).sample(n))
  affine = tfd.bijectors.Affine(
      scale_tril=tfd.fill_triangular(0.25 * p))
  def _fn(samples):
    scale = math_ops.exp(affine.forward(samples)).eval()
    return independent_lib.Independent(
        normal_lib.Normal(loc=0., scale=scale, validate_args=True),
        reinterpreted_batch_ndims=1)
  return _fn

batch_and_event_shape = [3, 2, 4]
sample0 = array_ops.zeros(batch_and_event_shape)
ar = autoregressive_lib.Autoregressive(
    self._normal_fn(batch_and_event_shape[-1]), sample0)
x = ar.sample([6, 5])
# ==> x.shape = [6, 5, 3, 2, 4]
prob_x = ar.prob(x)
# ==> x.shape = [6, 5, 3, 2]

References

[1]: George Papamakarios, Theo Pavlakou, and Iain Murray. Masked Autoregressive Flow for Density Estimation. In Neural Information Processing Systems, 2017. https://arxiv.org/abs/1705.07057

[2]: Aaron van den Oord, Nal Kalchbrenner, Oriol Vinyals, Lasse Espeholt, Alex Graves, and Koray Kavukcuoglu. Conditional Image Generation with PixelCNN Decoders. In Neural Information Processing Systems, 2016. https://arxiv.org/abs/1606.05328

distribution_fn Python callable which constructs a tfp.distributions.Distribution-like instance from a Tensor (e.g., sample0). The function must respect the "autoregressive property", i.e., there exists a permutation of event such that each coordinate is a diffeomorphic function of on preceding coordinates.
sample0 Initial input to distribution_fn; used to build the distribution in __init__ which in turn specifies this distribution's properties, e.g., event_shape, batch_shape, dtype. If unspecified, then distribution_fn should be default constructable.
num_steps Number of times distribution_fn is composed from samples, e.g., num_steps=2 implies distribution_fn(distribution_fn(sample0).sample(n)).sample().
validate_args Python bool. Whether to validate input with asserts. If validate_args is False, and the inputs are invalid, correct behavior is not guaranteed.
allow_nan_stats Python bool, default True. When True, statistics (e.g., mean, mode, variance) use the value "NaN" to indicate the result is undefined. When False, an exception is raised if one or more of the statistic's batch members are undefined.
name Python str name prefixed to Ops created by this class. Default value: "Autoregressive".

ValueError if num_steps and distribution_fn(sample0).event_shape.num_elements() are both None.
ValueError if num_steps < 1.

allow_nan_stats Python bool describing behavior when a stat is undefined.

Stats return +/- infinity when it makes sense. E.g., the variance of a Cauchy distribution is infinity. However, sometimes the statistic is undefined, e.g., if a distribution's pdf does not achieve a maximum within the support of the distribution, the mode is undefined. If the mean is undefined, then by definition the variance is undefined. E.g. the mean for Student's T for df = 1 is undefined (no clear way to say it is either + or - infinity), so the variance = E[(X - mean)**2] is also undefined.

batch_shape Shape of a single sample from a single event index as a TensorShape.

May be partially defined or unknown.

The batch dimensions are indexes into independent, non-identical parameterizations of this distribution.

distribution0

distribution_fn

dtype The DType of Tensors handled by this Distribution.
event_shape Shape of a single sample from a single batch as a TensorShape.

May be partially defined or unknown.

name Name prepended to all ops created by this Distribution.
num_steps

parameters Dictionary of parameters used to instantiate this Distribution.
reparameterization_type Describes how samples from the distribution are reparameterized.

Currently this is one of the static instances distributions.FULLY_REPARAMETERIZED or distributions.NOT_REPARAMETERIZED.

sample0

validate_args Python bool indicating possibly expensive checks are enabled.

Methods

batch_shape_tensor

View source

batch_shape_tensor(
    name='batch_shape_tensor'
)

Shape of a single sample from a single event index as a 1-D Tensor.

The batch dimensions are indexes into independent, non-identical parameterizations of this distribution.

Args
name name to give to the op

Returns
batch_shape Tensor.

cdf

View source

cdf(
    value, name='cdf'
)

Cumulative distribution function.

Given random variable X, the cumulative distribution function cdf is:

cdf(x) := P[X <= x]

Args
value float or double Tensor.
name Python str prepended to names of ops created by this function.

Returns
cdf a Tensor of shape sample_shape(x) + self.batch_shape with values of type self.dtype.

copy

View source

copy(
    **override_parameters_kwargs
)

Creates a deep copy of the distribution.

Args
**override_parameters_kwargs String/value dictionary of initialization arguments to override with new values.

Returns
distribution A new instance of type(self) initialized from the union of self.parameters and override_parameters_kwargs, i.e., dict(self.parameters, **override_parameters_kwargs).

covariance

View source

covariance(
    name='covariance'
)

Covariance.

Covariance is (possibly) defined only for non-scalar-event distributions.

For example, for a length-k, vector-valued distribution, it is calculated as,

Cov[i, j] = Covariance(X_i, X_j) = E[(X_i - E[X_i]) (X_j - E[X_j])]

where Cov is a (batch of) k x k matrix, 0 <= (i, j) < k, and E denotes expectation.

Alternatively, for non-vector, multivariate distributions (e.g., matrix-valued, Wishart), Covariance shall return a (batch of) matrices under some vectorization of the events, i.e.,

Cov[i, j] = Covariance(Vec(X)_i, Vec(X)_j) = [as above]

where Cov is a (batch of) k' x k' matrices, 0 <= (i, j) < k' = reduce_prod(event_shape), and Vec is some function mapping indices of this distribution's event dimensions to indices of a length-k' vector.

Args
name Python str prepended to names of ops created by this function.

Returns
covariance Floating-point Tensor with shape [B1, ..., Bn, k', k'] where the first n dimensions are batch coordinates and k' = reduce_prod(self.event_shape).

cross_entropy

View source

cross_entropy(
    other, name='cross_entropy'
)

Computes the (Shannon) cross entropy.

Denote this distribution (self) by P and the other distribution by Q. Assuming P, Q are absolutely continuous with respect to one another and permit densities p(x) dr(x) and q(x) dr(x), (Shanon) cross entropy is defined as:

H[P, Q] = E_p[-log q(X)] = -int_F p(x) log q(x) dr(x)

where F denotes the support of the random variable X ~ P.

Args
other tfp.distributions.Distribution instance.
name Python str prepended to names of ops created by this function.

Returns
cross_entropy self.dtype Tensor with shape [B1, ..., Bn] representing n different calculations of (Shanon) cross entropy.

entropy

View source

entropy(
    name='entropy'
)

Shannon entropy in nats.

event_shape_tensor

View source

event_shape_tensor(
    name='event_shape_tensor'
)

Shape of a single sample from a single batch as a 1-D int32 Tensor.

Args
name name to give to the op

Returns
event_shape Tensor.

is_scalar_batch

View source

is_scalar_batch(
    name='is_scalar_batch'
)

Indicates that batch_shape == [].

Args
name Python str prepended to names of ops created by this function.

Returns
is_scalar_batch bool scalar Tensor.

is_scalar_event

View source

is_scalar_event(
    name='is_scalar_event'
)

Indicates that event_shape == [].

Args
name Python str prepended to names of ops created by this function.

Returns
is_scalar_event bool scalar Tensor.

kl_divergence

View source

kl_divergence(
    other, name='kl_divergence'
)

Computes the Kullback--Leibler divergence.

Denote this distribution (self) by p and the other distribution by q. Assuming p, q are absolutely continuous with respect to reference measure r, the KL divergence is defined as:

KL[p, q] = E_p[log(p(X)/q(X))]
         = -int_F p(x) log q(x) dr(x) + int_F p(x) log p(x) dr(x)
         = H[p, q] - H[p]

where F denotes the support of the random variable X ~ p, H[., .] denotes (Shanon) cross entropy, and H[.] denotes (Shanon) entropy.

Args
other tfp.distributions.Distribution instance.
name Python str prepended to names of ops created by this function.

Returns
kl_divergence self.dtype Tensor with shape [B1, ..., Bn] representing n different calculations of the Kullback-Leibler divergence.

log_cdf

View source

log_cdf(
    value, name='log_cdf'
)

Log cumulative distribution function.

Given random variable X, the cumulative distribution function cdf is:

log_cdf(x) := Log[ P[X <= x] ]

Often, a numerical approximation can be used for log_cdf(x) that yields a more accurate answer than simply taking the logarithm of the cdf when x << -1.

Args
value float or double Tensor.
name Python str prepended to names of ops created by this function.

Returns
logcdf a Tensor of shape sample_shape(x) + self.batch_shape with values of type self.dtype.

log_prob

View source

log_prob(
    value, name='log_prob'
)

Log probability density/mass function.

Args
value float or double Tensor.
name Python str prepended to names of ops created by this function.

Returns
log_prob a Tensor of shape sample_shape(x) + self.batch_shape with values of type self.dtype.

log_survival_function

View source

log_survival_function(
    value, name='log_survival_function'
)

Log survival function.

Given random variable X, the survival function is defined:

log_survival_function(x) = Log[ P[X > x] ]
                         = Log[ 1 - P[X <= x] ]
                         = Log[ 1 - cdf(x) ]

Typically, different numerical approximations can be used for the log survival function, which are more accurate than 1 - cdf(x) when x >> 1.

Args
value float or double Tensor.
name Python str prepended to names of ops created by this function.

Returns
Tensor of shape sample_shape(x) + self.batch_shape with values of type self.dtype.

mean

View source

mean(
    name='mean'
)

Mean.

mode

View source

mode(
    name='mode'
)

Mode.

param_shapes

View source

@classmethod
param_shapes(
    sample_shape, name='DistributionParamShapes'
)

Shapes of parameters given the desired shape of a call to sample().

This is a class method that describes what key/value arguments are required to instantiate the given Distribution so that a particular shape is returned for that instance's call to sample().

Subclasses should override class method _param_shapes.

Args
sample_shape Tensor or python list/tuple. Desired shape of a call to sample().
name name to prepend ops with.

Returns
dict of parameter name to Tensor shapes.

param_static_shapes

View source

@classmethod
param_static_shapes(
    sample_shape
)

param_shapes with static (i.e. TensorShape) shapes.

This is a class method that describes what key/value arguments are required to instantiate the given Distribution so that a particular shape is returned for that instance's call to sample(). Assumes that the sample's shape is known statically.

Subclasses should override class method _param_shapes to return constant-valued tensors when constant values are fed.

Args
sample_shape TensorShape or python list/tuple. Desired shape of a call to sample().

Returns
dict of parameter name to TensorShape.

Raises
ValueError if sample_shape is a TensorShape and is not fully defined.

prob

View source

prob(
    value, name='prob'
)

Probability density/mass function.

Args
value float or double Tensor.
name Python str prepended to names of ops created by this function.

Returns
prob a Tensor of shape sample_shape(x) + self.batch_shape with values of type self.dtype.

quantile

View source

quantile(
    value, name='quantile'
)

Quantile function. Aka "inverse cdf" or "percent point function".

Given random variable X and p in [0, 1], the quantile is:

quantile(p) := x such that P[X <= x] == p

Args
value float or double Tensor.
name Python str prepended to names of ops created by this function.

Returns
quantile a Tensor of shape sample_shape(x) + self.batch_shape with values of type self.dtype.

sample

View source

sample(
    sample_shape=(), seed=None, name='sample'
)

Generate samples of the specified shape.

Note that a call to sample() without arguments will generate a single sample.

Args
sample_shape 0D or 1D int32 Tensor. Shape of the generated samples.
seed Python integer seed for RNG
name name to give to the op.

Returns
samples a Tensor with prepended dimensions sample_shape.

stddev

View source

stddev(
    name='stddev'
)

Standard deviation.

Standard deviation is defined as,

stddev = E[(X - E[X])**2]**0.5

where X is the random variable associated with this distribution, E denotes expectation, and stddev.shape = batch_shape + event_shape.

Args
name Python str prepended to names of ops created by this function.

Returns
stddev Floating-point Tensor with shape identical to batch_shape + event_shape, i.e., the same shape as self.mean().

survival_function

View source

survival_function(
    value, name='survival_function'
)

Survival function.

Given random variable X, the survival function is defined:

survival_function(x) = P[X > x]
                     = 1 - P[X <= x]
                     = 1 - cdf(x).

Args
value float or double Tensor.
name Python str prepended to names of ops created by this function.

Returns
Tensor of shape sample_shape(x) + self.batch_shape with values of type self.dtype.

variance

View source

variance(
    name='variance'
)

Variance.

Variance is defined as,

Var = E[(X - E[X])**2]

where X is the random variable associated with this distribution, E denotes expectation, and Var.shape = batch_shape + event_shape.

Args
name Python str prepended to names of ops created by this function.

Returns
variance Floating-point Tensor with shape identical to batch_shape + event_shape, i.e., the same shape as self.mean().