Zobacz na TensorFlow.org
Uruchom w Google Colab
Wyświetl źródło na GitHub
Pobierz notatnikW tym samouczku opartym na notatniku utworzymy i uruchomimy potoki TFX w celu sprawdzenia poprawności danych wejściowych i utworzenia modelu ML. Notebook ten jest oparty na rurociągu TFX my zbudowany w prosty TFX Pipeline Tutorial . Jeśli jeszcze nie przeczytałeś tego samouczka, powinieneś go przeczytać przed kontynuowaniem tego notatnika.
Pierwszym zadaniem w każdym projekcie data science lub ML jest zrozumienie i wyczyszczenie danych, co obejmuje:
- Zrozumienie typów danych, rozkładów i innych informacji (np. wartości średniej lub liczby unikalnych) na temat każdej cechy
- Generowanie wstępnego schematu opisującego dane
- Identyfikacja anomalii i braków danych w danych w odniesieniu do danego schematu
W tym samouczku stworzymy dwa potoki TFX.
Najpierw utworzymy potok do analizy zestawu danych i wygenerowania wstępnego schematu danego zestawu danych. Rurociąg ten obejmie dwa nowe komponenty, StatisticsGen i SchemaGen .
Po uzyskaniu odpowiedniego schematu danych utworzymy potok do trenowania modelu klasyfikacji ML na podstawie potoku z poprzedniego samouczka. W tym rurociągiem, będziemy używać schematu z pierwszego rurociągu oraz nowy składnik, ExampleValidator , do sprawdzania poprawności danych wejściowych.
Trzy nowe komponenty, StatisticsGen, SchemaGen i ExampleValidator, są składnikami TFX do analizy danych i walidacji, i są one realizowane za pomocą TensorFlow Data Validation bibliotekę.
Proszę zobaczyć Zrozumienie TFX Rurociągi , aby dowiedzieć się więcej na temat różnych koncepcji w TFX.
Ustawiać
Najpierw musimy zainstalować pakiet TFX Python i pobrać zestaw danych, którego użyjemy dla naszego modelu.
Ulepsz Pip
Aby uniknąć aktualizacji Pip w systemie, gdy działa on lokalnie, upewnij się, że działamy w Colab. Systemy lokalne można oczywiście aktualizować oddzielnie.
try:
import colab
!pip install --upgrade pip
except:
pass
Zainstaluj TFX
pip install -U tfx
Czy uruchomiłeś ponownie środowisko wykonawcze?
Jeśli korzystasz z Google Colab, przy pierwszym uruchomieniu powyższej komórki musisz ponownie uruchomić środowisko wykonawcze, klikając powyżej przycisk „RESTART RUNTIME” lub korzystając z menu „Runtime > Restart runtime...”. Wynika to ze sposobu, w jaki Colab ładuje paczki.
Sprawdź wersje TensorFlow i TFX.
import tensorflow as tf
print('TensorFlow version: {}'.format(tf.__version__))
from tfx import v1 as tfx
print('TFX version: {}'.format(tfx.__version__))
TensorFlow version: 2.6.2 TFX version: 1.4.0
Ustaw zmienne
Istnieje kilka zmiennych używanych do zdefiniowania potoku. Możesz dostosować te zmienne, jak chcesz. Domyślnie wszystkie dane wyjściowe z potoku będą generowane w bieżącym katalogu.
import os
# We will create two pipelines. One for schema generation and one for training.
SCHEMA_PIPELINE_NAME = "penguin-tfdv-schema"
PIPELINE_NAME = "penguin-tfdv"
# Output directory to store artifacts generated from the pipeline.
SCHEMA_PIPELINE_ROOT = os.path.join('pipelines', SCHEMA_PIPELINE_NAME)
PIPELINE_ROOT = os.path.join('pipelines', PIPELINE_NAME)
# Path to a SQLite DB file to use as an MLMD storage.
SCHEMA_METADATA_PATH = os.path.join('metadata', SCHEMA_PIPELINE_NAME,
'metadata.db')
METADATA_PATH = os.path.join('metadata', PIPELINE_NAME, 'metadata.db')
# Output directory where created models from the pipeline will be exported.
SERVING_MODEL_DIR = os.path.join('serving_model', PIPELINE_NAME)
from absl import logging
logging.set_verbosity(logging.INFO) # Set default logging level.
Przygotuj przykładowe dane
Pobierzemy przykładowy zestaw danych do użycia w naszym potoku TFX. Zbiór danych używamy jest Palmer Penguins zestaw danych , który jest również stosowany w innych przykładach TFX .
Ten zbiór danych zawiera cztery funkcje liczbowe:
- culmen_length_mm
- culmen_depth_mm
- flipper_length_mm
- body_mass_g
Wszystkie cechy zostały już znormalizowane do zakresu [0,1]. Będziemy budować model klasyfikacji który przewiduje species pingwinów.
Ponieważ komponent TFX ExampleGen odczytuje dane wejściowe z katalogu, musimy utworzyć katalog i skopiować do niego zbiór danych.
import urllib.request
import tempfile
DATA_ROOT = tempfile.mkdtemp(prefix='tfx-data') # Create a temporary directory.
_data_url = 'https://raw.githubusercontent.com/tensorflow/tfx/master/tfx/examples/penguin/data/labelled/penguins_processed.csv'
_data_filepath = os.path.join(DATA_ROOT, "data.csv")
urllib.request.urlretrieve(_data_url, _data_filepath)
('/tmp/tfx-datan3p7t1d2/data.csv', <http.client.HTTPMessage at 0x7f8d2f9f9110>)
Rzuć okiem na plik CSV.
head {_data_filepath}
species,culmen_length_mm,culmen_depth_mm,flipper_length_mm,body_mass_g 0,0.2545454545454545,0.6666666666666666,0.15254237288135594,0.2916666666666667 0,0.26909090909090905,0.5119047619047618,0.23728813559322035,0.3055555555555556 0,0.29818181818181805,0.5833333333333334,0.3898305084745763,0.1527777777777778 0,0.16727272727272732,0.7380952380952381,0.3559322033898305,0.20833333333333334 0,0.26181818181818167,0.892857142857143,0.3050847457627119,0.2638888888888889 0,0.24727272727272717,0.5595238095238096,0.15254237288135594,0.2569444444444444 0,0.25818181818181823,0.773809523809524,0.3898305084745763,0.5486111111111112 0,0.32727272727272727,0.5357142857142859,0.1694915254237288,0.1388888888888889 0,0.23636363636363636,0.9642857142857142,0.3220338983050847,0.3055555555555556
Powinieneś zobaczyć pięć kolumn funkcji. species jest jednym z 0, 1 lub 2, a wszystkie inne cechy powinny mieć wartości pomiędzy 0 a 1. Stworzymy rurociągu TFX analizy zbioru danych.
Wygeneruj wstępny schemat
Potoki TFX są definiowane za pomocą interfejsów API Pythona. Stworzymy potok, aby automatycznie wygenerować schemat z przykładów wejściowych. Ten schemat może być przeglądany przez człowieka i dostosowywany w razie potrzeby. Po sfinalizowaniu schematu można go wykorzystać do szkolenia i przykładowej walidacji w późniejszych zadaniach.
Oprócz CsvExampleGen który jest stosowany w prosty TFX Pipeline tutoriala użyjemy StatisticsGen i SchemaGen :
- StatisticsGen oblicza statystyki dla zbioru danych.
- SchemaGen analizuje statystyki i tworzy początkowy schemat danych.
Zobacz prowadnice dla każdego komponentu lub komponentów TFX samouczka , aby dowiedzieć się więcej na temat tych składników.
Napisz definicję potoku
Definiujemy funkcję do tworzenia potoku TFX. Pipeline przedmiot stanowi rurociąg TFX, który może być uruchamiany za pomocą jednego z systemów instrumentacji gazociągu TFX podpór.
def _create_schema_pipeline(pipeline_name: str,
pipeline_root: str,
data_root: str,
metadata_path: str) -> tfx.dsl.Pipeline:
"""Creates a pipeline for schema generation."""
# Brings data into the pipeline.
example_gen = tfx.components.CsvExampleGen(input_base=data_root)
# NEW: Computes statistics over data for visualization and schema generation.
statistics_gen = tfx.components.StatisticsGen(
examples=example_gen.outputs['examples'])
# NEW: Generates schema based on the generated statistics.
schema_gen = tfx.components.SchemaGen(
statistics=statistics_gen.outputs['statistics'], infer_feature_shape=True)
components = [
example_gen,
statistics_gen,
schema_gen,
]
return tfx.dsl.Pipeline(
pipeline_name=pipeline_name,
pipeline_root=pipeline_root,
metadata_connection_config=tfx.orchestration.metadata
.sqlite_metadata_connection_config(metadata_path),
components=components)
Uruchom rurociąg
Użyjemy LocalDagRunner jak w poprzednim ćwiczeniu.
tfx.orchestration.LocalDagRunner().run(
_create_schema_pipeline(
pipeline_name=SCHEMA_PIPELINE_NAME,
pipeline_root=SCHEMA_PIPELINE_ROOT,
data_root=DATA_ROOT,
metadata_path=SCHEMA_METADATA_PATH))
INFO:absl:Excluding no splits because exclude_splits is not set.
INFO:absl:Excluding no splits because exclude_splits is not set.
INFO:absl:Using deployment config:
executor_specs {
key: "CsvExampleGen"
value {
beam_executable_spec {
python_executor_spec {
class_path: "tfx.components.example_gen.csv_example_gen.executor.Executor"
}
}
}
}
executor_specs {
key: "SchemaGen"
value {
python_class_executable_spec {
class_path: "tfx.components.schema_gen.executor.Executor"
}
}
}
executor_specs {
key: "StatisticsGen"
value {
beam_executable_spec {
python_executor_spec {
class_path: "tfx.components.statistics_gen.executor.Executor"
}
}
}
}
custom_driver_specs {
key: "CsvExampleGen"
value {
python_class_executable_spec {
class_path: "tfx.components.example_gen.driver.FileBasedDriver"
}
}
}
metadata_connection_config {
sqlite {
filename_uri: "metadata/penguin-tfdv-schema/metadata.db"
connection_mode: READWRITE_OPENCREATE
}
}
INFO:absl:Using connection config:
sqlite {
filename_uri: "metadata/penguin-tfdv-schema/metadata.db"
connection_mode: READWRITE_OPENCREATE
}
INFO:absl:Component CsvExampleGen is running.
INFO:absl:Running launcher for node_info {
type {
name: "tfx.components.example_gen.csv_example_gen.component.CsvExampleGen"
}
id: "CsvExampleGen"
}
contexts {
contexts {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-tfdv-schema"
}
}
}
contexts {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T11:10:06.420329"
}
}
}
contexts {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-tfdv-schema.CsvExampleGen"
}
}
}
}
outputs {
outputs {
key: "examples"
value {
artifact_spec {
type {
name: "Examples"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
properties {
key: "version"
value: INT
}
}
}
}
}
}
parameters {
parameters {
key: "input_base"
value {
field_value {
string_value: "/tmp/tfx-datan3p7t1d2"
}
}
}
parameters {
key: "input_config"
value {
field_value {
string_value: "{\n \"splits\": [\n {\n \"name\": \"single_split\",\n \"pattern\": \"*\"\n }\n ]\n}"
}
}
}
parameters {
key: "output_config"
value {
field_value {
string_value: "{\n \"split_config\": {\n \"splits\": [\n {\n \"hash_buckets\": 2,\n \"name\": \"train\"\n },\n {\n \"hash_buckets\": 1,\n \"name\": \"eval\"\n }\n ]\n }\n}"
}
}
}
parameters {
key: "output_data_format"
value {
field_value {
int_value: 6
}
}
}
parameters {
key: "output_file_format"
value {
field_value {
int_value: 5
}
}
}
}
downstream_nodes: "StatisticsGen"
execution_options {
caching_options {
}
}
INFO:absl:MetadataStore with DB connection initialized
WARNING: Logging before InitGoogleLogging() is written to STDERR
I1205 11:10:06.444468 4006 rdbms_metadata_access_object.cc:686] No property is defined for the Type
I1205 11:10:06.453292 4006 rdbms_metadata_access_object.cc:686] No property is defined for the Type
I1205 11:10:06.460209 4006 rdbms_metadata_access_object.cc:686] No property is defined for the Type
I1205 11:10:06.467104 4006 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:select span and version = (0, None)
INFO:absl:latest span and version = (0, None)
INFO:absl:MetadataStore with DB connection initialized
INFO:absl:Going to run a new execution 1
I1205 11:10:06.521926 4006 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:Going to run a new execution: ExecutionInfo(execution_id=1, input_dict={}, output_dict=defaultdict(<class 'list'>, {'examples': [Artifact(artifact: uri: "pipelines/penguin-tfdv-schema/CsvExampleGen/examples/1"
custom_properties {
key: "input_fingerprint"
value {
string_value: "split:single_split,num_files:1,total_bytes:25648,xor_checksum:1638702606,sum_checksum:1638702606"
}
}
custom_properties {
key: "name"
value {
string_value: "penguin-tfdv-schema:2021-12-05T11:10:06.420329:CsvExampleGen:examples:0"
}
}
custom_properties {
key: "span"
value {
int_value: 0
}
}
, artifact_type: name: "Examples"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
properties {
key: "version"
value: INT
}
)]}), exec_properties={'input_config': '{\n "splits": [\n {\n "name": "single_split",\n "pattern": "*"\n }\n ]\n}', 'output_config': '{\n "split_config": {\n "splits": [\n {\n "hash_buckets": 2,\n "name": "train"\n },\n {\n "hash_buckets": 1,\n "name": "eval"\n }\n ]\n }\n}', 'input_base': '/tmp/tfx-datan3p7t1d2', 'output_file_format': 5, 'output_data_format': 6, 'span': 0, 'version': None, 'input_fingerprint': 'split:single_split,num_files:1,total_bytes:25648,xor_checksum:1638702606,sum_checksum:1638702606'}, execution_output_uri='pipelines/penguin-tfdv-schema/CsvExampleGen/.system/executor_execution/1/executor_output.pb', stateful_working_dir='pipelines/penguin-tfdv-schema/CsvExampleGen/.system/stateful_working_dir/2021-12-05T11:10:06.420329', tmp_dir='pipelines/penguin-tfdv-schema/CsvExampleGen/.system/executor_execution/1/.temp/', pipeline_node=node_info {
type {
name: "tfx.components.example_gen.csv_example_gen.component.CsvExampleGen"
}
id: "CsvExampleGen"
}
contexts {
contexts {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-tfdv-schema"
}
}
}
contexts {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T11:10:06.420329"
}
}
}
contexts {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-tfdv-schema.CsvExampleGen"
}
}
}
}
outputs {
outputs {
key: "examples"
value {
artifact_spec {
type {
name: "Examples"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
properties {
key: "version"
value: INT
}
}
}
}
}
}
parameters {
parameters {
key: "input_base"
value {
field_value {
string_value: "/tmp/tfx-datan3p7t1d2"
}
}
}
parameters {
key: "input_config"
value {
field_value {
string_value: "{\n \"splits\": [\n {\n \"name\": \"single_split\",\n \"pattern\": \"*\"\n }\n ]\n}"
}
}
}
parameters {
key: "output_config"
value {
field_value {
string_value: "{\n \"split_config\": {\n \"splits\": [\n {\n \"hash_buckets\": 2,\n \"name\": \"train\"\n },\n {\n \"hash_buckets\": 1,\n \"name\": \"eval\"\n }\n ]\n }\n}"
}
}
}
parameters {
key: "output_data_format"
value {
field_value {
int_value: 6
}
}
}
parameters {
key: "output_file_format"
value {
field_value {
int_value: 5
}
}
}
}
downstream_nodes: "StatisticsGen"
execution_options {
caching_options {
}
}
, pipeline_info=id: "penguin-tfdv-schema"
, pipeline_run_id='2021-12-05T11:10:06.420329')
INFO:absl:Generating examples.
WARNING:apache_beam.runners.interactive.interactive_environment:Dependencies required for Interactive Beam PCollection visualization are not available, please use: `pip install apache-beam[interactive]` to install necessary dependencies to enable all data visualization features.
INFO:absl:Processing input csv data /tmp/tfx-datan3p7t1d2/* to TFExample.
WARNING:root:Make sure that locally built Python SDK docker image has Python 3.7 interpreter.
WARNING:apache_beam.io.tfrecordio:Couldn't find python-snappy so the implementation of _TFRecordUtil._masked_crc32c is not as fast as it could be.
INFO:absl:Examples generated.
INFO:absl:Cleaning up stateless execution info.
INFO:absl:Execution 1 succeeded.
INFO:absl:Cleaning up stateful execution info.
INFO:absl:Publishing output artifacts defaultdict(<class 'list'>, {'examples': [Artifact(artifact: uri: "pipelines/penguin-tfdv-schema/CsvExampleGen/examples/1"
custom_properties {
key: "input_fingerprint"
value {
string_value: "split:single_split,num_files:1,total_bytes:25648,xor_checksum:1638702606,sum_checksum:1638702606"
}
}
custom_properties {
key: "name"
value {
string_value: "penguin-tfdv-schema:2021-12-05T11:10:06.420329:CsvExampleGen:examples:0"
}
}
custom_properties {
key: "span"
value {
int_value: 0
}
}
custom_properties {
key: "tfx_version"
value {
string_value: "1.4.0"
}
}
, artifact_type: name: "Examples"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
properties {
key: "version"
value: INT
}
)]}) for execution 1
INFO:absl:MetadataStore with DB connection initialized
INFO:absl:Component CsvExampleGen is finished.
INFO:absl:Component StatisticsGen is running.
INFO:absl:Running launcher for node_info {
type {
name: "tfx.components.statistics_gen.component.StatisticsGen"
}
id: "StatisticsGen"
}
contexts {
contexts {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-tfdv-schema"
}
}
}
contexts {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T11:10:06.420329"
}
}
}
contexts {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-tfdv-schema.StatisticsGen"
}
}
}
}
inputs {
inputs {
key: "examples"
value {
channels {
producer_node_query {
id: "CsvExampleGen"
}
context_queries {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-tfdv-schema"
}
}
}
context_queries {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T11:10:06.420329"
}
}
}
context_queries {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-tfdv-schema.CsvExampleGen"
}
}
}
artifact_query {
type {
name: "Examples"
}
}
output_key: "examples"
}
min_count: 1
}
}
}
outputs {
outputs {
key: "statistics"
value {
artifact_spec {
type {
name: "ExampleStatistics"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
}
}
}
}
}
parameters {
parameters {
key: "exclude_splits"
value {
field_value {
string_value: "[]"
}
}
}
}
upstream_nodes: "CsvExampleGen"
downstream_nodes: "SchemaGen"
execution_options {
caching_options {
}
}
INFO:absl:MetadataStore with DB connection initialized
I1205 11:10:08.104562 4006 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:MetadataStore with DB connection initialized
INFO:absl:Going to run a new execution 2
INFO:absl:Going to run a new execution: ExecutionInfo(execution_id=2, input_dict={'examples': [Artifact(artifact: id: 1
type_id: 15
uri: "pipelines/penguin-tfdv-schema/CsvExampleGen/examples/1"
properties {
key: "split_names"
value {
string_value: "[\"train\", \"eval\"]"
}
}
custom_properties {
key: "file_format"
value {
string_value: "tfrecords_gzip"
}
}
custom_properties {
key: "input_fingerprint"
value {
string_value: "split:single_split,num_files:1,total_bytes:25648,xor_checksum:1638702606,sum_checksum:1638702606"
}
}
custom_properties {
key: "name"
value {
string_value: "penguin-tfdv-schema:2021-12-05T11:10:06.420329:CsvExampleGen:examples:0"
}
}
custom_properties {
key: "payload_format"
value {
string_value: "FORMAT_TF_EXAMPLE"
}
}
custom_properties {
key: "span"
value {
int_value: 0
}
}
custom_properties {
key: "tfx_version"
value {
string_value: "1.4.0"
}
}
state: LIVE
create_time_since_epoch: 1638702608076
last_update_time_since_epoch: 1638702608076
, artifact_type: id: 15
name: "Examples"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
properties {
key: "version"
value: INT
}
)]}, output_dict=defaultdict(<class 'list'>, {'statistics': [Artifact(artifact: uri: "pipelines/penguin-tfdv-schema/StatisticsGen/statistics/2"
custom_properties {
key: "name"
value {
string_value: "penguin-tfdv-schema:2021-12-05T11:10:06.420329:StatisticsGen:statistics:0"
}
}
, artifact_type: name: "ExampleStatistics"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
)]}), exec_properties={'exclude_splits': '[]'}, execution_output_uri='pipelines/penguin-tfdv-schema/StatisticsGen/.system/executor_execution/2/executor_output.pb', stateful_working_dir='pipelines/penguin-tfdv-schema/StatisticsGen/.system/stateful_working_dir/2021-12-05T11:10:06.420329', tmp_dir='pipelines/penguin-tfdv-schema/StatisticsGen/.system/executor_execution/2/.temp/', pipeline_node=node_info {
type {
name: "tfx.components.statistics_gen.component.StatisticsGen"
}
id: "StatisticsGen"
}
contexts {
contexts {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-tfdv-schema"
}
}
}
contexts {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T11:10:06.420329"
}
}
}
contexts {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-tfdv-schema.StatisticsGen"
}
}
}
}
inputs {
inputs {
key: "examples"
value {
channels {
producer_node_query {
id: "CsvExampleGen"
}
context_queries {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-tfdv-schema"
}
}
}
context_queries {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T11:10:06.420329"
}
}
}
context_queries {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-tfdv-schema.CsvExampleGen"
}
}
}
artifact_query {
type {
name: "Examples"
}
}
output_key: "examples"
}
min_count: 1
}
}
}
outputs {
outputs {
key: "statistics"
value {
artifact_spec {
type {
name: "ExampleStatistics"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
}
}
}
}
}
parameters {
parameters {
key: "exclude_splits"
value {
field_value {
string_value: "[]"
}
}
}
}
upstream_nodes: "CsvExampleGen"
downstream_nodes: "SchemaGen"
execution_options {
caching_options {
}
}
, pipeline_info=id: "penguin-tfdv-schema"
, pipeline_run_id='2021-12-05T11:10:06.420329')
INFO:absl:Generating statistics for split train.
INFO:absl:Statistics for split train written to pipelines/penguin-tfdv-schema/StatisticsGen/statistics/2/Split-train.
INFO:absl:Generating statistics for split eval.
INFO:absl:Statistics for split eval written to pipelines/penguin-tfdv-schema/StatisticsGen/statistics/2/Split-eval.
WARNING:root:Make sure that locally built Python SDK docker image has Python 3.7 interpreter.
INFO:absl:Cleaning up stateless execution info.
INFO:absl:Execution 2 succeeded.
INFO:absl:Cleaning up stateful execution info.
INFO:absl:Publishing output artifacts defaultdict(<class 'list'>, {'statistics': [Artifact(artifact: uri: "pipelines/penguin-tfdv-schema/StatisticsGen/statistics/2"
custom_properties {
key: "name"
value {
string_value: "penguin-tfdv-schema:2021-12-05T11:10:06.420329:StatisticsGen:statistics:0"
}
}
custom_properties {
key: "tfx_version"
value {
string_value: "1.4.0"
}
}
, artifact_type: name: "ExampleStatistics"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
)]}) for execution 2
INFO:absl:MetadataStore with DB connection initialized
INFO:absl:Component StatisticsGen is finished.
INFO:absl:Component SchemaGen is running.
INFO:absl:Running launcher for node_info {
type {
name: "tfx.components.schema_gen.component.SchemaGen"
}
id: "SchemaGen"
}
contexts {
contexts {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-tfdv-schema"
}
}
}
contexts {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T11:10:06.420329"
}
}
}
contexts {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-tfdv-schema.SchemaGen"
}
}
}
}
inputs {
inputs {
key: "statistics"
value {
channels {
producer_node_query {
id: "StatisticsGen"
}
context_queries {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-tfdv-schema"
}
}
}
context_queries {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T11:10:06.420329"
}
}
}
context_queries {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-tfdv-schema.StatisticsGen"
}
}
}
artifact_query {
type {
name: "ExampleStatistics"
}
}
output_key: "statistics"
}
min_count: 1
}
}
}
outputs {
outputs {
key: "schema"
value {
artifact_spec {
type {
name: "Schema"
}
}
}
}
}
parameters {
parameters {
key: "exclude_splits"
value {
field_value {
string_value: "[]"
}
}
}
parameters {
key: "infer_feature_shape"
value {
field_value {
int_value: 1
}
}
}
}
upstream_nodes: "StatisticsGen"
execution_options {
caching_options {
}
}
INFO:absl:MetadataStore with DB connection initialized
I1205 11:10:10.975282 4006 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:MetadataStore with DB connection initialized
INFO:absl:Going to run a new execution 3
INFO:absl:Going to run a new execution: ExecutionInfo(execution_id=3, input_dict={'statistics': [Artifact(artifact: id: 2
type_id: 17
uri: "pipelines/penguin-tfdv-schema/StatisticsGen/statistics/2"
properties {
key: "split_names"
value {
string_value: "[\"train\", \"eval\"]"
}
}
custom_properties {
key: "name"
value {
string_value: "penguin-tfdv-schema:2021-12-05T11:10:06.420329:StatisticsGen:statistics:0"
}
}
custom_properties {
key: "tfx_version"
value {
string_value: "1.4.0"
}
}
state: LIVE
create_time_since_epoch: 1638702610957
last_update_time_since_epoch: 1638702610957
, artifact_type: id: 17
name: "ExampleStatistics"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
)]}, output_dict=defaultdict(<class 'list'>, {'schema': [Artifact(artifact: uri: "pipelines/penguin-tfdv-schema/SchemaGen/schema/3"
custom_properties {
key: "name"
value {
string_value: "penguin-tfdv-schema:2021-12-05T11:10:06.420329:SchemaGen:schema:0"
}
}
, artifact_type: name: "Schema"
)]}), exec_properties={'exclude_splits': '[]', 'infer_feature_shape': 1}, execution_output_uri='pipelines/penguin-tfdv-schema/SchemaGen/.system/executor_execution/3/executor_output.pb', stateful_working_dir='pipelines/penguin-tfdv-schema/SchemaGen/.system/stateful_working_dir/2021-12-05T11:10:06.420329', tmp_dir='pipelines/penguin-tfdv-schema/SchemaGen/.system/executor_execution/3/.temp/', pipeline_node=node_info {
type {
name: "tfx.components.schema_gen.component.SchemaGen"
}
id: "SchemaGen"
}
contexts {
contexts {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-tfdv-schema"
}
}
}
contexts {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T11:10:06.420329"
}
}
}
contexts {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-tfdv-schema.SchemaGen"
}
}
}
}
inputs {
inputs {
key: "statistics"
value {
channels {
producer_node_query {
id: "StatisticsGen"
}
context_queries {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-tfdv-schema"
}
}
}
context_queries {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T11:10:06.420329"
}
}
}
context_queries {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-tfdv-schema.StatisticsGen"
}
}
}
artifact_query {
type {
name: "ExampleStatistics"
}
}
output_key: "statistics"
}
min_count: 1
}
}
}
outputs {
outputs {
key: "schema"
value {
artifact_spec {
type {
name: "Schema"
}
}
}
}
}
parameters {
parameters {
key: "exclude_splits"
value {
field_value {
string_value: "[]"
}
}
}
parameters {
key: "infer_feature_shape"
value {
field_value {
int_value: 1
}
}
}
}
upstream_nodes: "StatisticsGen"
execution_options {
caching_options {
}
}
, pipeline_info=id: "penguin-tfdv-schema"
, pipeline_run_id='2021-12-05T11:10:06.420329')
INFO:absl:Processing schema from statistics for split train.
INFO:absl:Processing schema from statistics for split eval.
INFO:absl:Schema written to pipelines/penguin-tfdv-schema/SchemaGen/schema/3/schema.pbtxt.
INFO:absl:Cleaning up stateless execution info.
INFO:absl:Execution 3 succeeded.
INFO:absl:Cleaning up stateful execution info.
INFO:absl:Publishing output artifacts defaultdict(<class 'list'>, {'schema': [Artifact(artifact: uri: "pipelines/penguin-tfdv-schema/SchemaGen/schema/3"
custom_properties {
key: "name"
value {
string_value: "penguin-tfdv-schema:2021-12-05T11:10:06.420329:SchemaGen:schema:0"
}
}
custom_properties {
key: "tfx_version"
value {
string_value: "1.4.0"
}
}
, artifact_type: name: "Schema"
)]}) for execution 3
INFO:absl:MetadataStore with DB connection initialized
INFO:absl:Component SchemaGen is finished.
I1205 11:10:11.010145 4006 rdbms_metadata_access_object.cc:686] No property is defined for the Type
Powinien pojawić się komunikat „INFO:absl:Component SchemaGen został zakończony”. jeśli potok zakończył się pomyślnie.
Zbadamy dane wyjściowe potoku, aby zrozumieć nasz zestaw danych.
Przejrzyj wyniki rurociągu
Jak wyjaśniono w poprzednim ćwiczeniu rurociąg TFX wytwarza dwa rodzaje wyjściowych, artefakty i metadanych dB (MLMD) zawierającego metadane przedmiotów i wykonywanie rurowych. Zdefiniowaliśmy lokalizację tych wyjść w powyższych komórkach. Domyślnie artefakty są przechowywane pod pipelines katalogu i metadane są przechowywane w bazie danych sqlite pod metadata katalogu.
Za pomocą interfejsów API MLMD można programowo lokalizować te dane wyjściowe. Najpierw zdefiniujemy kilka funkcji narzędziowych do wyszukiwania artefaktów wyjściowych, które właśnie zostały utworzone.
from ml_metadata.proto import metadata_store_pb2
# Non-public APIs, just for showcase.
from tfx.orchestration.portable.mlmd import execution_lib
# TODO(b/171447278): Move these functions into the TFX library.
def get_latest_artifacts(metadata, pipeline_name, component_id):
"""Output artifacts of the latest run of the component."""
context = metadata.store.get_context_by_type_and_name(
'node', f'{pipeline_name}.{component_id}')
executions = metadata.store.get_executions_by_context(context.id)
latest_execution = max(executions,
key=lambda e:e.last_update_time_since_epoch)
return execution_lib.get_artifacts_dict(metadata, latest_execution.id,
[metadata_store_pb2.Event.OUTPUT])
# Non-public APIs, just for showcase.
from tfx.orchestration.experimental.interactive import visualizations
def visualize_artifacts(artifacts):
"""Visualizes artifacts using standard visualization modules."""
for artifact in artifacts:
visualization = visualizations.get_registry().get_visualization(
artifact.type_name)
if visualization:
visualization.display(artifact)
from tfx.orchestration.experimental.interactive import standard_visualizations
standard_visualizations.register_standard_visualizations()
Teraz możemy zbadać dane wyjściowe z wykonania potoku.
# Non-public APIs, just for showcase.
from tfx.orchestration.metadata import Metadata
from tfx.types import standard_component_specs
metadata_connection_config = tfx.orchestration.metadata.sqlite_metadata_connection_config(
SCHEMA_METADATA_PATH)
with Metadata(metadata_connection_config) as metadata_handler:
# Find output artifacts from MLMD.
stat_gen_output = get_latest_artifacts(metadata_handler, SCHEMA_PIPELINE_NAME,
'StatisticsGen')
stats_artifacts = stat_gen_output[standard_component_specs.STATISTICS_KEY]
schema_gen_output = get_latest_artifacts(metadata_handler,
SCHEMA_PIPELINE_NAME, 'SchemaGen')
schema_artifacts = schema_gen_output[standard_component_specs.SCHEMA_KEY]
INFO:absl:MetadataStore with DB connection initialized
Nadszedł czas na zbadanie wyników z każdego komponentu. Jak opisano powyżej, Tensorflow poprawności danych (TFDV) stosuje się StatisticsGen i SchemaGen i TFDV również wizualizację wyjść z tych składników.
W tym samouczku użyjemy metod pomocniczych wizualizacji w TFX, które wewnętrznie używają TFDV do wyświetlania wizualizacji.
Sprawdź dane wyjściowe z StatisticsGen
# docs-infra: no-execute
visualize_artifacts(stats_artifacts)
Możesz zobaczyć różne statystyki dla danych wejściowych. Statystyki te są dostarczane do SchemaGen skonstruować wstępny schemat danych automatycznie.
Sprawdź dane wyjściowe ze SchemaGen
visualize_artifacts(schema_artifacts)
Ten schemat jest automatycznie wywnioskowany z danych wyjściowych StatisticsGen. Powinieneś być w stanie zobaczyć 4 funkcje FLOAT i 1 funkcję INT.
Wyeksportuj schemat do wykorzystania w przyszłości
Musimy przejrzeć i udoskonalić wygenerowany schemat. Przejrzany schemat musi być utrwalony, aby mógł być używany w kolejnych potokach na potrzeby uczenia modelu ML. Innymi słowy, możesz chcieć dodać plik schematu do systemu kontroli wersji dla rzeczywistych przypadków użycia. W tym samouczku dla uproszczenia po prostu skopiujemy schemat do predefiniowanej ścieżki systemu plików.
import shutil
_schema_filename = 'schema.pbtxt'
SCHEMA_PATH = 'schema'
os.makedirs(SCHEMA_PATH, exist_ok=True)
_generated_path = os.path.join(schema_artifacts[0].uri, _schema_filename)
# Copy the 'schema.pbtxt' file from the artifact uri to a predefined path.
shutil.copy(_generated_path, SCHEMA_PATH)
'schema/schema.pbtxt'
Plik schematu wykorzystuje format tekstowy protokół Buffer oraz instancję TensorFlow Metadane Schema proto .
print(f'Schema at {SCHEMA_PATH}-----')
!cat {SCHEMA_PATH}/*
Schema at schema-----
feature {
name: "body_mass_g"
type: FLOAT
presence {
min_fraction: 1.0
min_count: 1
}
shape {
dim {
size: 1
}
}
}
feature {
name: "culmen_depth_mm"
type: FLOAT
presence {
min_fraction: 1.0
min_count: 1
}
shape {
dim {
size: 1
}
}
}
feature {
name: "culmen_length_mm"
type: FLOAT
presence {
min_fraction: 1.0
min_count: 1
}
shape {
dim {
size: 1
}
}
}
feature {
name: "flipper_length_mm"
type: FLOAT
presence {
min_fraction: 1.0
min_count: 1
}
shape {
dim {
size: 1
}
}
}
feature {
name: "species"
type: INT
presence {
min_fraction: 1.0
min_count: 1
}
shape {
dim {
size: 1
}
}
}
W razie potrzeby należy przejrzeć i ewentualnie edytować definicję schematu. W tym samouczku użyjemy wygenerowanego schematu w niezmienionej postaci.
Weryfikuj przykłady danych wejściowych i trenuj model ML
Będziemy wracać do rurociągu, który stworzyliśmy w prosty TFX Pipeline Tutorial , trenować model ML i użyć wygenerowanego schematu do pisania kodu modelu szkolenia.
Będziemy również dodać ExampleValidator komponent, który będzie szukał anomalii i brakujących wartości w zbiorze danych przychodzących w odniesieniu do schematu.
Napisz kod szkolenia modelu
Musimy napisać kod modelu jak my w prosty TFX Pipeline Tutorial .
Sam model jest taki sam jak w poprzednim samouczku, ale tym razem użyjemy schematu wygenerowanego z poprzedniego potoku zamiast ręcznego określania funkcji. Większość kodu nie została zmieniona. Jedyną różnicą jest to, że nie musimy określać nazw i typów funkcji w tym pliku. Zamiast tego, czytamy je z pliku schematu.
_trainer_module_file = 'penguin_trainer.py'
%%writefile {_trainer_module_file}
from typing import List
from absl import logging
import tensorflow as tf
from tensorflow import keras
from tensorflow_transform.tf_metadata import schema_utils
from tfx import v1 as tfx
from tfx_bsl.public import tfxio
from tensorflow_metadata.proto.v0 import schema_pb2
# We don't need to specify _FEATURE_KEYS and _FEATURE_SPEC any more.
# Those information can be read from the given schema file.
_LABEL_KEY = 'species'
_TRAIN_BATCH_SIZE = 20
_EVAL_BATCH_SIZE = 10
def _input_fn(file_pattern: List[str],
data_accessor: tfx.components.DataAccessor,
schema: schema_pb2.Schema,
batch_size: int = 200) -> tf.data.Dataset:
"""Generates features and label for training.
Args:
file_pattern: List of paths or patterns of input tfrecord files.
data_accessor: DataAccessor for converting input to RecordBatch.
schema: schema of the input data.
batch_size: representing the number of consecutive elements of returned
dataset to combine in a single batch
Returns:
A dataset that contains (features, indices) tuple where features is a
dictionary of Tensors, and indices is a single Tensor of label indices.
"""
return data_accessor.tf_dataset_factory(
file_pattern,
tfxio.TensorFlowDatasetOptions(
batch_size=batch_size, label_key=_LABEL_KEY),
schema=schema).repeat()
def _build_keras_model(schema: schema_pb2.Schema) -> tf.keras.Model:
"""Creates a DNN Keras model for classifying penguin data.
Returns:
A Keras Model.
"""
# The model below is built with Functional API, please refer to
# https://www.tensorflow.org/guide/keras/overview for all API options.
# ++ Changed code: Uses all features in the schema except the label.
feature_keys = [f.name for f in schema.feature if f.name != _LABEL_KEY]
inputs = [keras.layers.Input(shape=(1,), name=f) for f in feature_keys]
# ++ End of the changed code.
d = keras.layers.concatenate(inputs)
for _ in range(2):
d = keras.layers.Dense(8, activation='relu')(d)
outputs = keras.layers.Dense(3)(d)
model = keras.Model(inputs=inputs, outputs=outputs)
model.compile(
optimizer=keras.optimizers.Adam(1e-2),
loss=tf.keras.losses.SparseCategoricalCrossentropy(from_logits=True),
metrics=[keras.metrics.SparseCategoricalAccuracy()])
model.summary(print_fn=logging.info)
return model
# TFX Trainer will call this function.
def run_fn(fn_args: tfx.components.FnArgs):
"""Train the model based on given args.
Args:
fn_args: Holds args used to train the model as name/value pairs.
"""
# ++ Changed code: Reads in schema file passed to the Trainer component.
schema = tfx.utils.parse_pbtxt_file(fn_args.schema_path, schema_pb2.Schema())
# ++ End of the changed code.
train_dataset = _input_fn(
fn_args.train_files,
fn_args.data_accessor,
schema,
batch_size=_TRAIN_BATCH_SIZE)
eval_dataset = _input_fn(
fn_args.eval_files,
fn_args.data_accessor,
schema,
batch_size=_EVAL_BATCH_SIZE)
model = _build_keras_model(schema)
model.fit(
train_dataset,
steps_per_epoch=fn_args.train_steps,
validation_data=eval_dataset,
validation_steps=fn_args.eval_steps)
# The result of the training should be saved in `fn_args.serving_model_dir`
# directory.
model.save(fn_args.serving_model_dir, save_format='tf')
Writing penguin_trainer.py
Teraz wykonałeś wszystkie kroki przygotowawcze, aby zbudować potok TFX na potrzeby uczenia modelu.
Napisz definicję potoku
Dodamy dwa nowe komponenty, Importer i ExampleValidator . Importer wprowadza zewnętrzny plik do potoku TFX. W tym przypadku jest to plik zawierający definicję schematu. ExampleValidator zbada dane wejściowe i sprawdzi, czy wszystkie dane wejściowe są zgodne z podanym przez nas schematem danych.
def _create_pipeline(pipeline_name: str, pipeline_root: str, data_root: str,
schema_path: str, module_file: str, serving_model_dir: str,
metadata_path: str) -> tfx.dsl.Pipeline:
"""Creates a pipeline using predefined schema with TFX."""
# Brings data into the pipeline.
example_gen = tfx.components.CsvExampleGen(input_base=data_root)
# Computes statistics over data for visualization and example validation.
statistics_gen = tfx.components.StatisticsGen(
examples=example_gen.outputs['examples'])
# NEW: Import the schema.
schema_importer = tfx.dsl.Importer(
source_uri=schema_path,
artifact_type=tfx.types.standard_artifacts.Schema).with_id(
'schema_importer')
# NEW: Performs anomaly detection based on statistics and data schema.
example_validator = tfx.components.ExampleValidator(
statistics=statistics_gen.outputs['statistics'],
schema=schema_importer.outputs['result'])
# Uses user-provided Python function that trains a model.
trainer = tfx.components.Trainer(
module_file=module_file,
examples=example_gen.outputs['examples'],
schema=schema_importer.outputs['result'], # Pass the imported schema.
train_args=tfx.proto.TrainArgs(num_steps=100),
eval_args=tfx.proto.EvalArgs(num_steps=5))
# Pushes the model to a filesystem destination.
pusher = tfx.components.Pusher(
model=trainer.outputs['model'],
push_destination=tfx.proto.PushDestination(
filesystem=tfx.proto.PushDestination.Filesystem(
base_directory=serving_model_dir)))
components = [
example_gen,
# NEW: Following three components were added to the pipeline.
statistics_gen,
schema_importer,
example_validator,
trainer,
pusher,
]
return tfx.dsl.Pipeline(
pipeline_name=pipeline_name,
pipeline_root=pipeline_root,
metadata_connection_config=tfx.orchestration.metadata
.sqlite_metadata_connection_config(metadata_path),
components=components)
Uruchom rurociąg
tfx.orchestration.LocalDagRunner().run(
_create_pipeline(
pipeline_name=PIPELINE_NAME,
pipeline_root=PIPELINE_ROOT,
data_root=DATA_ROOT,
schema_path=SCHEMA_PATH,
module_file=_trainer_module_file,
serving_model_dir=SERVING_MODEL_DIR,
metadata_path=METADATA_PATH))
INFO:absl:Excluding no splits because exclude_splits is not set.
INFO:absl:Excluding no splits because exclude_splits is not set.
INFO:absl:Generating ephemeral wheel package for '/tmpfs/src/temp/docs/tutorials/tfx/penguin_trainer.py' (including modules: ['penguin_trainer']).
INFO:absl:User module package has hash fingerprint version 000876a22093ec764e3751d5a3ed939f1b107d1d6ade133f954ea2a767b8dfb2.
INFO:absl:Executing: ['/tmpfs/src/tf_docs_env/bin/python', '/tmp/tmp50dqc5bp/_tfx_generated_setup.py', 'bdist_wheel', '--bdist-dir', '/tmp/tmp6_kn7s87', '--dist-dir', '/tmp/tmpwt7plki0']
/tmpfs/src/tf_docs_env/lib/python3.7/site-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
setuptools.SetuptoolsDeprecationWarning,
listing git files failed - pretending there aren't any
INFO:absl:Successfully built user code wheel distribution at 'pipelines/penguin-tfdv/_wheels/tfx_user_code_Trainer-0.0+000876a22093ec764e3751d5a3ed939f1b107d1d6ade133f954ea2a767b8dfb2-py3-none-any.whl'; target user module is 'penguin_trainer'.
INFO:absl:Full user module path is 'penguin_trainer@pipelines/penguin-tfdv/_wheels/tfx_user_code_Trainer-0.0+000876a22093ec764e3751d5a3ed939f1b107d1d6ade133f954ea2a767b8dfb2-py3-none-any.whl'
INFO:absl:Using deployment config:
executor_specs {
key: "CsvExampleGen"
value {
beam_executable_spec {
python_executor_spec {
class_path: "tfx.components.example_gen.csv_example_gen.executor.Executor"
}
}
}
}
executor_specs {
key: "ExampleValidator"
value {
python_class_executable_spec {
class_path: "tfx.components.example_validator.executor.Executor"
}
}
}
executor_specs {
key: "Pusher"
value {
python_class_executable_spec {
class_path: "tfx.components.pusher.executor.Executor"
}
}
}
executor_specs {
key: "StatisticsGen"
value {
beam_executable_spec {
python_executor_spec {
class_path: "tfx.components.statistics_gen.executor.Executor"
}
}
}
}
executor_specs {
key: "Trainer"
value {
python_class_executable_spec {
class_path: "tfx.components.trainer.executor.GenericExecutor"
}
}
}
custom_driver_specs {
key: "CsvExampleGen"
value {
python_class_executable_spec {
class_path: "tfx.components.example_gen.driver.FileBasedDriver"
}
}
}
metadata_connection_config {
sqlite {
filename_uri: "metadata/penguin-tfdv/metadata.db"
connection_mode: READWRITE_OPENCREATE
}
}
INFO:absl:Using connection config:
sqlite {
filename_uri: "metadata/penguin-tfdv/metadata.db"
connection_mode: READWRITE_OPENCREATE
}
INFO:absl:Component CsvExampleGen is running.
INFO:absl:Running launcher for node_info {
type {
name: "tfx.components.example_gen.csv_example_gen.component.CsvExampleGen"
}
id: "CsvExampleGen"
}
contexts {
contexts {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-tfdv"
}
}
}
contexts {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T11:10:11.667239"
}
}
}
contexts {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-tfdv.CsvExampleGen"
}
}
}
}
outputs {
outputs {
key: "examples"
value {
artifact_spec {
type {
name: "Examples"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
properties {
key: "version"
value: INT
}
}
}
}
}
}
parameters {
parameters {
key: "input_base"
value {
field_value {
string_value: "/tmp/tfx-datan3p7t1d2"
}
}
}
parameters {
key: "input_config"
value {
field_value {
string_value: "{\n \"splits\": [\n {\n \"name\": \"single_split\",\n \"pattern\": \"*\"\n }\n ]\n}"
}
}
}
parameters {
key: "output_config"
value {
field_value {
string_value: "{\n \"split_config\": {\n \"splits\": [\n {\n \"hash_buckets\": 2,\n \"name\": \"train\"\n },\n {\n \"hash_buckets\": 1,\n \"name\": \"eval\"\n }\n ]\n }\n}"
}
}
}
parameters {
key: "output_data_format"
value {
field_value {
int_value: 6
}
}
}
parameters {
key: "output_file_format"
value {
field_value {
int_value: 5
}
}
}
}
downstream_nodes: "StatisticsGen"
downstream_nodes: "Trainer"
execution_options {
caching_options {
}
}
INFO:absl:MetadataStore with DB connection initialized
I1205 11:10:11.685647 4006 rdbms_metadata_access_object.cc:686] No property is defined for the Type
I1205 11:10:11.692644 4006 rdbms_metadata_access_object.cc:686] No property is defined for the Type
I1205 11:10:11.699625 4006 rdbms_metadata_access_object.cc:686] No property is defined for the Type
I1205 11:10:11.708110 4006 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:select span and version = (0, None)
INFO:absl:latest span and version = (0, None)
INFO:absl:MetadataStore with DB connection initialized
INFO:absl:Going to run a new execution 1
I1205 11:10:11.722760 4006 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:Going to run a new execution: ExecutionInfo(execution_id=1, input_dict={}, output_dict=defaultdict(<class 'list'>, {'examples': [Artifact(artifact: uri: "pipelines/penguin-tfdv/CsvExampleGen/examples/1"
custom_properties {
key: "input_fingerprint"
value {
string_value: "split:single_split,num_files:1,total_bytes:25648,xor_checksum:1638702606,sum_checksum:1638702606"
}
}
custom_properties {
key: "name"
value {
string_value: "penguin-tfdv:2021-12-05T11:10:11.667239:CsvExampleGen:examples:0"
}
}
custom_properties {
key: "span"
value {
int_value: 0
}
}
, artifact_type: name: "Examples"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
properties {
key: "version"
value: INT
}
)]}), exec_properties={'input_base': '/tmp/tfx-datan3p7t1d2', 'input_config': '{\n "splits": [\n {\n "name": "single_split",\n "pattern": "*"\n }\n ]\n}', 'output_data_format': 6, 'output_config': '{\n "split_config": {\n "splits": [\n {\n "hash_buckets": 2,\n "name": "train"\n },\n {\n "hash_buckets": 1,\n "name": "eval"\n }\n ]\n }\n}', 'output_file_format': 5, 'span': 0, 'version': None, 'input_fingerprint': 'split:single_split,num_files:1,total_bytes:25648,xor_checksum:1638702606,sum_checksum:1638702606'}, execution_output_uri='pipelines/penguin-tfdv/CsvExampleGen/.system/executor_execution/1/executor_output.pb', stateful_working_dir='pipelines/penguin-tfdv/CsvExampleGen/.system/stateful_working_dir/2021-12-05T11:10:11.667239', tmp_dir='pipelines/penguin-tfdv/CsvExampleGen/.system/executor_execution/1/.temp/', pipeline_node=node_info {
type {
name: "tfx.components.example_gen.csv_example_gen.component.CsvExampleGen"
}
id: "CsvExampleGen"
}
contexts {
contexts {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-tfdv"
}
}
}
contexts {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T11:10:11.667239"
}
}
}
contexts {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-tfdv.CsvExampleGen"
}
}
}
}
outputs {
outputs {
key: "examples"
value {
artifact_spec {
type {
name: "Examples"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
properties {
key: "version"
value: INT
}
}
}
}
}
}
parameters {
parameters {
key: "input_base"
value {
field_value {
string_value: "/tmp/tfx-datan3p7t1d2"
}
}
}
parameters {
key: "input_config"
value {
field_value {
string_value: "{\n \"splits\": [\n {\n \"name\": \"single_split\",\n \"pattern\": \"*\"\n }\n ]\n}"
}
}
}
parameters {
key: "output_config"
value {
field_value {
string_value: "{\n \"split_config\": {\n \"splits\": [\n {\n \"hash_buckets\": 2,\n \"name\": \"train\"\n },\n {\n \"hash_buckets\": 1,\n \"name\": \"eval\"\n }\n ]\n }\n}"
}
}
}
parameters {
key: "output_data_format"
value {
field_value {
int_value: 6
}
}
}
parameters {
key: "output_file_format"
value {
field_value {
int_value: 5
}
}
}
}
downstream_nodes: "StatisticsGen"
downstream_nodes: "Trainer"
execution_options {
caching_options {
}
}
, pipeline_info=id: "penguin-tfdv"
, pipeline_run_id='2021-12-05T11:10:11.667239')
INFO:absl:Generating examples.
INFO:absl:Processing input csv data /tmp/tfx-datan3p7t1d2/* to TFExample.
running bdist_wheel
running build
running build_py
creating build
creating build/lib
copying penguin_trainer.py -> build/lib
installing to /tmp/tmp6_kn7s87
running install
running install_lib
copying build/lib/penguin_trainer.py -> /tmp/tmp6_kn7s87
running install_egg_info
running egg_info
creating tfx_user_code_Trainer.egg-info
writing tfx_user_code_Trainer.egg-info/PKG-INFO
writing dependency_links to tfx_user_code_Trainer.egg-info/dependency_links.txt
writing top-level names to tfx_user_code_Trainer.egg-info/top_level.txt
writing manifest file 'tfx_user_code_Trainer.egg-info/SOURCES.txt'
reading manifest file 'tfx_user_code_Trainer.egg-info/SOURCES.txt'
writing manifest file 'tfx_user_code_Trainer.egg-info/SOURCES.txt'
Copying tfx_user_code_Trainer.egg-info to /tmp/tmp6_kn7s87/tfx_user_code_Trainer-0.0+000876a22093ec764e3751d5a3ed939f1b107d1d6ade133f954ea2a767b8dfb2-py3.7.egg-info
running install_scripts
creating /tmp/tmp6_kn7s87/tfx_user_code_Trainer-0.0+000876a22093ec764e3751d5a3ed939f1b107d1d6ade133f954ea2a767b8dfb2.dist-info/WHEEL
creating '/tmp/tmpwt7plki0/tfx_user_code_Trainer-0.0+000876a22093ec764e3751d5a3ed939f1b107d1d6ade133f954ea2a767b8dfb2-py3-none-any.whl' and adding '/tmp/tmp6_kn7s87' to it
adding 'penguin_trainer.py'
adding 'tfx_user_code_Trainer-0.0+000876a22093ec764e3751d5a3ed939f1b107d1d6ade133f954ea2a767b8dfb2.dist-info/METADATA'
adding 'tfx_user_code_Trainer-0.0+000876a22093ec764e3751d5a3ed939f1b107d1d6ade133f954ea2a767b8dfb2.dist-info/WHEEL'
adding 'tfx_user_code_Trainer-0.0+000876a22093ec764e3751d5a3ed939f1b107d1d6ade133f954ea2a767b8dfb2.dist-info/top_level.txt'
adding 'tfx_user_code_Trainer-0.0+000876a22093ec764e3751d5a3ed939f1b107d1d6ade133f954ea2a767b8dfb2.dist-info/RECORD'
removing /tmp/tmp6_kn7s87
WARNING:root:Make sure that locally built Python SDK docker image has Python 3.7 interpreter.
INFO:absl:Examples generated.
INFO:absl:Cleaning up stateless execution info.
INFO:absl:Execution 1 succeeded.
INFO:absl:Cleaning up stateful execution info.
INFO:absl:Publishing output artifacts defaultdict(<class 'list'>, {'examples': [Artifact(artifact: uri: "pipelines/penguin-tfdv/CsvExampleGen/examples/1"
custom_properties {
key: "input_fingerprint"
value {
string_value: "split:single_split,num_files:1,total_bytes:25648,xor_checksum:1638702606,sum_checksum:1638702606"
}
}
custom_properties {
key: "name"
value {
string_value: "penguin-tfdv:2021-12-05T11:10:11.667239:CsvExampleGen:examples:0"
}
}
custom_properties {
key: "span"
value {
int_value: 0
}
}
custom_properties {
key: "tfx_version"
value {
string_value: "1.4.0"
}
}
, artifact_type: name: "Examples"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
properties {
key: "version"
value: INT
}
)]}) for execution 1
INFO:absl:MetadataStore with DB connection initialized
INFO:absl:Component CsvExampleGen is finished.
INFO:absl:Component schema_importer is running.
INFO:absl:Running launcher for node_info {
type {
name: "tfx.dsl.components.common.importer.Importer"
}
id: "schema_importer"
}
contexts {
contexts {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-tfdv"
}
}
}
contexts {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T11:10:11.667239"
}
}
}
contexts {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-tfdv.schema_importer"
}
}
}
}
outputs {
outputs {
key: "result"
value {
artifact_spec {
type {
name: "Schema"
}
}
}
}
}
parameters {
parameters {
key: "artifact_uri"
value {
field_value {
string_value: "schema"
}
}
}
parameters {
key: "reimport"
value {
field_value {
int_value: 0
}
}
}
}
downstream_nodes: "ExampleValidator"
downstream_nodes: "Trainer"
execution_options {
caching_options {
}
}
INFO:absl:Running as an importer node.
INFO:absl:MetadataStore with DB connection initialized
I1205 11:10:12.796727 4006 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:Processing source uri: schema, properties: {}, custom_properties: {}
INFO:absl:Component schema_importer is finished.
I1205 11:10:12.806819 4006 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:Component StatisticsGen is running.
INFO:absl:Running launcher for node_info {
type {
name: "tfx.components.statistics_gen.component.StatisticsGen"
}
id: "StatisticsGen"
}
contexts {
contexts {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-tfdv"
}
}
}
contexts {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T11:10:11.667239"
}
}
}
contexts {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-tfdv.StatisticsGen"
}
}
}
}
inputs {
inputs {
key: "examples"
value {
channels {
producer_node_query {
id: "CsvExampleGen"
}
context_queries {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-tfdv"
}
}
}
context_queries {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T11:10:11.667239"
}
}
}
context_queries {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-tfdv.CsvExampleGen"
}
}
}
artifact_query {
type {
name: "Examples"
}
}
output_key: "examples"
}
min_count: 1
}
}
}
outputs {
outputs {
key: "statistics"
value {
artifact_spec {
type {
name: "ExampleStatistics"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
}
}
}
}
}
parameters {
parameters {
key: "exclude_splits"
value {
field_value {
string_value: "[]"
}
}
}
}
upstream_nodes: "CsvExampleGen"
downstream_nodes: "ExampleValidator"
execution_options {
caching_options {
}
}
INFO:absl:MetadataStore with DB connection initialized
I1205 11:10:12.827589 4006 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:MetadataStore with DB connection initialized
INFO:absl:Going to run a new execution 3
INFO:absl:Going to run a new execution: ExecutionInfo(execution_id=3, input_dict={'examples': [Artifact(artifact: id: 1
type_id: 15
uri: "pipelines/penguin-tfdv/CsvExampleGen/examples/1"
properties {
key: "split_names"
value {
string_value: "[\"train\", \"eval\"]"
}
}
custom_properties {
key: "file_format"
value {
string_value: "tfrecords_gzip"
}
}
custom_properties {
key: "input_fingerprint"
value {
string_value: "split:single_split,num_files:1,total_bytes:25648,xor_checksum:1638702606,sum_checksum:1638702606"
}
}
custom_properties {
key: "name"
value {
string_value: "penguin-tfdv:2021-12-05T11:10:11.667239:CsvExampleGen:examples:0"
}
}
custom_properties {
key: "payload_format"
value {
string_value: "FORMAT_TF_EXAMPLE"
}
}
custom_properties {
key: "span"
value {
int_value: 0
}
}
custom_properties {
key: "tfx_version"
value {
string_value: "1.4.0"
}
}
state: LIVE
create_time_since_epoch: 1638702612780
last_update_time_since_epoch: 1638702612780
, artifact_type: id: 15
name: "Examples"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
properties {
key: "version"
value: INT
}
)]}, output_dict=defaultdict(<class 'list'>, {'statistics': [Artifact(artifact: uri: "pipelines/penguin-tfdv/StatisticsGen/statistics/3"
custom_properties {
key: "name"
value {
string_value: "penguin-tfdv:2021-12-05T11:10:11.667239:StatisticsGen:statistics:0"
}
}
, artifact_type: name: "ExampleStatistics"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
)]}), exec_properties={'exclude_splits': '[]'}, execution_output_uri='pipelines/penguin-tfdv/StatisticsGen/.system/executor_execution/3/executor_output.pb', stateful_working_dir='pipelines/penguin-tfdv/StatisticsGen/.system/stateful_working_dir/2021-12-05T11:10:11.667239', tmp_dir='pipelines/penguin-tfdv/StatisticsGen/.system/executor_execution/3/.temp/', pipeline_node=node_info {
type {
name: "tfx.components.statistics_gen.component.StatisticsGen"
}
id: "StatisticsGen"
}
contexts {
contexts {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-tfdv"
}
}
}
contexts {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T11:10:11.667239"
}
}
}
contexts {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-tfdv.StatisticsGen"
}
}
}
}
inputs {
inputs {
key: "examples"
value {
channels {
producer_node_query {
id: "CsvExampleGen"
}
context_queries {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-tfdv"
}
}
}
context_queries {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T11:10:11.667239"
}
}
}
context_queries {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-tfdv.CsvExampleGen"
}
}
}
artifact_query {
type {
name: "Examples"
}
}
output_key: "examples"
}
min_count: 1
}
}
}
outputs {
outputs {
key: "statistics"
value {
artifact_spec {
type {
name: "ExampleStatistics"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
}
}
}
}
}
parameters {
parameters {
key: "exclude_splits"
value {
field_value {
string_value: "[]"
}
}
}
}
upstream_nodes: "CsvExampleGen"
downstream_nodes: "ExampleValidator"
execution_options {
caching_options {
}
}
, pipeline_info=id: "penguin-tfdv"
, pipeline_run_id='2021-12-05T11:10:11.667239')
INFO:absl:Generating statistics for split train.
INFO:absl:Statistics for split train written to pipelines/penguin-tfdv/StatisticsGen/statistics/3/Split-train.
INFO:absl:Generating statistics for split eval.
INFO:absl:Statistics for split eval written to pipelines/penguin-tfdv/StatisticsGen/statistics/3/Split-eval.
WARNING:root:Make sure that locally built Python SDK docker image has Python 3.7 interpreter.
INFO:absl:Cleaning up stateless execution info.
INFO:absl:Execution 3 succeeded.
INFO:absl:Cleaning up stateful execution info.
INFO:absl:Publishing output artifacts defaultdict(<class 'list'>, {'statistics': [Artifact(artifact: uri: "pipelines/penguin-tfdv/StatisticsGen/statistics/3"
custom_properties {
key: "name"
value {
string_value: "penguin-tfdv:2021-12-05T11:10:11.667239:StatisticsGen:statistics:0"
}
}
custom_properties {
key: "tfx_version"
value {
string_value: "1.4.0"
}
}
, artifact_type: name: "ExampleStatistics"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
)]}) for execution 3
INFO:absl:MetadataStore with DB connection initialized
INFO:absl:Component StatisticsGen is finished.
INFO:absl:Component Trainer is running.
INFO:absl:Running launcher for node_info {
type {
name: "tfx.components.trainer.component.Trainer"
}
id: "Trainer"
}
contexts {
contexts {
type {
name: "pipeline"
}
name {
field_value {
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INFO:absl:MetadataStore with DB connection initialized
I1205 11:10:15.426606 4006 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:MetadataStore with DB connection initialized
INFO:absl:Going to run a new execution 4
INFO:absl:Going to run a new execution: ExecutionInfo(execution_id=4, input_dict={'examples': [Artifact(artifact: id: 1
type_id: 15
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, pipeline_info=id: "penguin-tfdv"
, pipeline_run_id='2021-12-05T11:10:11.667239')
INFO:absl:Train on the 'train' split when train_args.splits is not set.
INFO:absl:Evaluate on the 'eval' split when eval_args.splits is not set.
INFO:absl:udf_utils.get_fn {'eval_args': '{\n "num_steps": 5\n}', 'module_path': 'penguin_trainer@pipelines/penguin-tfdv/_wheels/tfx_user_code_Trainer-0.0+000876a22093ec764e3751d5a3ed939f1b107d1d6ade133f954ea2a767b8dfb2-py3-none-any.whl', 'custom_config': 'null', 'train_args': '{\n "num_steps": 100\n}'} 'run_fn'
INFO:absl:Installing 'pipelines/penguin-tfdv/_wheels/tfx_user_code_Trainer-0.0+000876a22093ec764e3751d5a3ed939f1b107d1d6ade133f954ea2a767b8dfb2-py3-none-any.whl' to a temporary directory.
INFO:absl:Executing: ['/tmpfs/src/tf_docs_env/bin/python', '-m', 'pip', 'install', '--target', '/tmp/tmpbb1l9_v7', 'pipelines/penguin-tfdv/_wheels/tfx_user_code_Trainer-0.0+000876a22093ec764e3751d5a3ed939f1b107d1d6ade133f954ea2a767b8dfb2-py3-none-any.whl']
Processing ./pipelines/penguin-tfdv/_wheels/tfx_user_code_Trainer-0.0+000876a22093ec764e3751d5a3ed939f1b107d1d6ade133f954ea2a767b8dfb2-py3-none-any.whl
INFO:absl:Successfully installed 'pipelines/penguin-tfdv/_wheels/tfx_user_code_Trainer-0.0+000876a22093ec764e3751d5a3ed939f1b107d1d6ade133f954ea2a767b8dfb2-py3-none-any.whl'.
INFO:absl:Training model.
INFO:absl:Feature body_mass_g has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature culmen_depth_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature culmen_length_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature flipper_length_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature species has a shape dim {
size: 1
}
. Setting to DenseTensor.
Installing collected packages: tfx-user-code-Trainer
Successfully installed tfx-user-code-Trainer-0.0+000876a22093ec764e3751d5a3ed939f1b107d1d6ade133f954ea2a767b8dfb2
INFO:absl:Feature body_mass_g has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature culmen_depth_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature culmen_length_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature flipper_length_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature species has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature body_mass_g has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature culmen_depth_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature culmen_length_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature flipper_length_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature species has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature body_mass_g has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature culmen_depth_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature culmen_length_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature flipper_length_mm has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Feature species has a shape dim {
size: 1
}
. Setting to DenseTensor.
INFO:absl:Model: "model"
INFO:absl:__________________________________________________________________________________________________
INFO:absl:Layer (type) Output Shape Param # Connected to
INFO:absl:==================================================================================================
INFO:absl:body_mass_g (InputLayer) [(None, 1)] 0
INFO:absl:__________________________________________________________________________________________________
INFO:absl:culmen_depth_mm (InputLayer) [(None, 1)] 0
INFO:absl:__________________________________________________________________________________________________
INFO:absl:culmen_length_mm (InputLayer) [(None, 1)] 0
INFO:absl:__________________________________________________________________________________________________
INFO:absl:flipper_length_mm (InputLayer) [(None, 1)] 0
INFO:absl:__________________________________________________________________________________________________
INFO:absl:concatenate (Concatenate) (None, 4) 0 body_mass_g[0][0]
INFO:absl: culmen_depth_mm[0][0]
INFO:absl: culmen_length_mm[0][0]
INFO:absl: flipper_length_mm[0][0]
INFO:absl:__________________________________________________________________________________________________
INFO:absl:dense (Dense) (None, 8) 40 concatenate[0][0]
INFO:absl:__________________________________________________________________________________________________
INFO:absl:dense_1 (Dense) (None, 8) 72 dense[0][0]
INFO:absl:__________________________________________________________________________________________________
INFO:absl:dense_2 (Dense) (None, 3) 27 dense_1[0][0]
INFO:absl:==================================================================================================
INFO:absl:Total params: 139
INFO:absl:Trainable params: 139
INFO:absl:Non-trainable params: 0
INFO:absl:__________________________________________________________________________________________________
100/100 [==============================] - 1s 3ms/step - loss: 0.5752 - sparse_categorical_accuracy: 0.8165 - val_loss: 0.2294 - val_sparse_categorical_accuracy: 0.9400
2021-12-05 11:10:20.208161: W tensorflow/python/util/util.cc:348] Sets are not currently considered sequences, but this may change in the future, so consider avoiding using them.
INFO:tensorflow:Assets written to: pipelines/penguin-tfdv/Trainer/model/4/Format-Serving/assets
INFO:tensorflow:Assets written to: pipelines/penguin-tfdv/Trainer/model/4/Format-Serving/assets
INFO:absl:Training complete. Model written to pipelines/penguin-tfdv/Trainer/model/4/Format-Serving. ModelRun written to pipelines/penguin-tfdv/Trainer/model_run/4
INFO:absl:Cleaning up stateless execution info.
INFO:absl:Execution 4 succeeded.
INFO:absl:Cleaning up stateful execution info.
INFO:absl:Publishing output artifacts defaultdict(<class 'list'>, {'model_run': [Artifact(artifact: uri: "pipelines/penguin-tfdv/Trainer/model_run/4"
custom_properties {
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custom_properties {
key: "tfx_version"
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, artifact_type: name: "Model"
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INFO:absl:MetadataStore with DB connection initialized
INFO:absl:Component Trainer is finished.
I1205 11:10:20.766410 4006 rdbms_metadata_access_object.cc:686] No property is defined for the Type
I1205 11:10:20.770478 4006 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:Component ExampleValidator is running.
INFO:absl:Running launcher for node_info {
type {
name: "tfx.components.example_validator.component.ExampleValidator"
}
id: "ExampleValidator"
}
contexts {
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outputs {
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INFO:absl:MetadataStore with DB connection initialized
I1205 11:10:20.793696 4006 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:MetadataStore with DB connection initialized
INFO:absl:Going to run a new execution 5
INFO:absl:Going to run a new execution: ExecutionInfo(execution_id=5, input_dict={'statistics': [Artifact(artifact: id: 3
type_id: 19
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}
name {
field_value {
string_value: "penguin-tfdv"
}
}
}
context_queries {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T11:10:11.667239"
}
}
}
context_queries {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-tfdv.schema_importer"
}
}
}
artifact_query {
type {
name: "Schema"
}
}
output_key: "result"
}
min_count: 1
}
}
inputs {
key: "statistics"
value {
channels {
producer_node_query {
id: "StatisticsGen"
}
context_queries {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-tfdv"
}
}
}
context_queries {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T11:10:11.667239"
}
}
}
context_queries {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-tfdv.StatisticsGen"
}
}
}
artifact_query {
type {
name: "ExampleStatistics"
}
}
output_key: "statistics"
}
min_count: 1
}
}
}
outputs {
outputs {
key: "anomalies"
value {
artifact_spec {
type {
name: "ExampleAnomalies"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
}
}
}
}
}
parameters {
parameters {
key: "exclude_splits"
value {
field_value {
string_value: "[]"
}
}
}
}
upstream_nodes: "StatisticsGen"
upstream_nodes: "schema_importer"
execution_options {
caching_options {
}
}
, pipeline_info=id: "penguin-tfdv"
, pipeline_run_id='2021-12-05T11:10:11.667239')
INFO:absl:Validating schema against the computed statistics for split train.
INFO:absl:Validation complete for split train. Anomalies written to pipelines/penguin-tfdv/ExampleValidator/anomalies/5/Split-train.
INFO:absl:Validating schema against the computed statistics for split eval.
INFO:absl:Validation complete for split eval. Anomalies written to pipelines/penguin-tfdv/ExampleValidator/anomalies/5/Split-eval.
INFO:absl:Cleaning up stateless execution info.
INFO:absl:Execution 5 succeeded.
INFO:absl:Cleaning up stateful execution info.
INFO:absl:Publishing output artifacts defaultdict(<class 'list'>, {'anomalies': [Artifact(artifact: uri: "pipelines/penguin-tfdv/ExampleValidator/anomalies/5"
custom_properties {
key: "name"
value {
string_value: "penguin-tfdv:2021-12-05T11:10:11.667239:ExampleValidator:anomalies:0"
}
}
custom_properties {
key: "tfx_version"
value {
string_value: "1.4.0"
}
}
, artifact_type: name: "ExampleAnomalies"
properties {
key: "span"
value: INT
}
properties {
key: "split_names"
value: STRING
}
)]}) for execution 5
INFO:absl:MetadataStore with DB connection initialized
INFO:absl:Component ExampleValidator is finished.
INFO:absl:Component Pusher is running.
INFO:absl:Running launcher for node_info {
type {
name: "tfx.components.pusher.component.Pusher"
}
id: "Pusher"
}
contexts {
contexts {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-tfdv"
}
}
}
contexts {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T11:10:11.667239"
}
}
}
contexts {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-tfdv.Pusher"
}
}
}
}
inputs {
inputs {
key: "model"
value {
channels {
producer_node_query {
id: "Trainer"
}
context_queries {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-tfdv"
}
}
}
context_queries {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T11:10:11.667239"
}
}
}
context_queries {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-tfdv.Trainer"
}
}
}
artifact_query {
type {
name: "Model"
}
}
output_key: "model"
}
}
}
}
outputs {
outputs {
key: "pushed_model"
value {
artifact_spec {
type {
name: "PushedModel"
}
}
}
}
}
parameters {
parameters {
key: "custom_config"
value {
field_value {
string_value: "null"
}
}
}
parameters {
key: "push_destination"
value {
field_value {
string_value: "{\n \"filesystem\": {\n \"base_directory\": \"serving_model/penguin-tfdv\"\n }\n}"
}
}
}
}
upstream_nodes: "Trainer"
execution_options {
caching_options {
}
}
INFO:absl:MetadataStore with DB connection initialized
INFO:absl:MetadataStore with DB connection initialized
I1205 11:10:20.848567 4006 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:Going to run a new execution 6
INFO:absl:Going to run a new execution: ExecutionInfo(execution_id=6, input_dict={'model': [Artifact(artifact: id: 5
type_id: 22
uri: "pipelines/penguin-tfdv/Trainer/model/4"
custom_properties {
key: "name"
value {
string_value: "penguin-tfdv:2021-12-05T11:10:11.667239:Trainer:model:0"
}
}
custom_properties {
key: "tfx_version"
value {
string_value: "1.4.0"
}
}
state: LIVE
create_time_since_epoch: 1638702620774
last_update_time_since_epoch: 1638702620774
, artifact_type: id: 22
name: "Model"
)]}, output_dict=defaultdict(<class 'list'>, {'pushed_model': [Artifact(artifact: uri: "pipelines/penguin-tfdv/Pusher/pushed_model/6"
custom_properties {
key: "name"
value {
string_value: "penguin-tfdv:2021-12-05T11:10:11.667239:Pusher:pushed_model:0"
}
}
, artifact_type: name: "PushedModel"
)]}), exec_properties={'push_destination': '{\n "filesystem": {\n "base_directory": "serving_model/penguin-tfdv"\n }\n}', 'custom_config': 'null'}, execution_output_uri='pipelines/penguin-tfdv/Pusher/.system/executor_execution/6/executor_output.pb', stateful_working_dir='pipelines/penguin-tfdv/Pusher/.system/stateful_working_dir/2021-12-05T11:10:11.667239', tmp_dir='pipelines/penguin-tfdv/Pusher/.system/executor_execution/6/.temp/', pipeline_node=node_info {
type {
name: "tfx.components.pusher.component.Pusher"
}
id: "Pusher"
}
contexts {
contexts {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-tfdv"
}
}
}
contexts {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T11:10:11.667239"
}
}
}
contexts {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-tfdv.Pusher"
}
}
}
}
inputs {
inputs {
key: "model"
value {
channels {
producer_node_query {
id: "Trainer"
}
context_queries {
type {
name: "pipeline"
}
name {
field_value {
string_value: "penguin-tfdv"
}
}
}
context_queries {
type {
name: "pipeline_run"
}
name {
field_value {
string_value: "2021-12-05T11:10:11.667239"
}
}
}
context_queries {
type {
name: "node"
}
name {
field_value {
string_value: "penguin-tfdv.Trainer"
}
}
}
artifact_query {
type {
name: "Model"
}
}
output_key: "model"
}
}
}
}
outputs {
outputs {
key: "pushed_model"
value {
artifact_spec {
type {
name: "PushedModel"
}
}
}
}
}
parameters {
parameters {
key: "custom_config"
value {
field_value {
string_value: "null"
}
}
}
parameters {
key: "push_destination"
value {
field_value {
string_value: "{\n \"filesystem\": {\n \"base_directory\": \"serving_model/penguin-tfdv\"\n }\n}"
}
}
}
}
upstream_nodes: "Trainer"
execution_options {
caching_options {
}
}
, pipeline_info=id: "penguin-tfdv"
, pipeline_run_id='2021-12-05T11:10:11.667239')
WARNING:absl:Pusher is going to push the model without validation. Consider using Evaluator or InfraValidator in your pipeline.
INFO:absl:Model version: 1638702620
INFO:absl:Model written to serving path serving_model/penguin-tfdv/1638702620.
INFO:absl:Model pushed to pipelines/penguin-tfdv/Pusher/pushed_model/6.
INFO:absl:Cleaning up stateless execution info.
INFO:absl:Execution 6 succeeded.
INFO:absl:Cleaning up stateful execution info.
INFO:absl:Publishing output artifacts defaultdict(<class 'list'>, {'pushed_model': [Artifact(artifact: uri: "pipelines/penguin-tfdv/Pusher/pushed_model/6"
custom_properties {
key: "name"
value {
string_value: "penguin-tfdv:2021-12-05T11:10:11.667239:Pusher:pushed_model:0"
}
}
custom_properties {
key: "tfx_version"
value {
string_value: "1.4.0"
}
}
, artifact_type: name: "PushedModel"
)]}) for execution 6
INFO:absl:MetadataStore with DB connection initialized
I1205 11:10:20.879335 4006 rdbms_metadata_access_object.cc:686] No property is defined for the Type
INFO:absl:Component Pusher is finished.
Powinieneś zobaczyć "INFO:absl:Component Pusher jest gotowy." jeśli potok zakończył się pomyślnie.
Zbadaj wyjścia rurociągu
Przeszkoliliśmy model klasyfikacji dla pingwinów, a także zweryfikowaliśmy przykłady danych wejściowych w komponencie ExampleValidator. Możemy przeanalizować dane wyjściowe z ExampleValidator, tak jak zrobiliśmy to w poprzednim potoku.
metadata_connection_config = tfx.orchestration.metadata.sqlite_metadata_connection_config(
METADATA_PATH)
with Metadata(metadata_connection_config) as metadata_handler:
ev_output = get_latest_artifacts(metadata_handler, PIPELINE_NAME,
'ExampleValidator')
anomalies_artifacts = ev_output[standard_component_specs.ANOMALIES_KEY]
INFO:absl:MetadataStore with DB connection initialized
Przykładowe anomalie z ExampleValidator można również wizualizować.
visualize_artifacts(anomalies_artifacts)
Powinieneś zobaczyć „Nie znaleziono anomalii” dla każdego fragmentu przykładów. Ponieważ użyliśmy tych samych danych, które były używane do generowania schematu w tym potoku, nie oczekuje się tutaj żadnej anomalii. Jeśli ten potok zostanie uruchomiony wielokrotnie z nowymi danymi przychodzącymi, ExampleValidator powinien być w stanie znaleźć wszelkie rozbieżności między nowymi danymi a istniejącym schematem.
Jeśli zostaną znalezione jakiekolwiek anomalie, możesz przejrzeć swoje dane, aby sprawdzić, czy jakiekolwiek przykłady nie są zgodne z Twoimi założeniami. Przydatne mogą być dane wyjściowe z innych komponentów, takich jak StatisticsGen. Jednak wszelkie znalezione anomalie NIE będą blokować dalszych wykonań potoku.
Następne kroki
Można znaleźć więcej środków na https://www.tensorflow.org/tfx/tutorials
Proszę zobaczyć Zrozumienie TFX Rurociągi , aby dowiedzieć się więcej na temat różnych koncepcji w TFX.